Caveat verdict

phylo-tree

88
🟢 Trusted
No high-risk patterns surfaced by the deep scan — automated capability review, not behavioral proof.

Phylogenetic analysis tool running local bioinformatics scripts with optional UniProt API for sequence retrieval; executionSinkDetected reflects legitimate scientific CLI usage.

⚠ Flagged for review — coarse, uncorroborated signal, not a confirmed exploit. Review the config yourself before installing.

Automated static analysis — not a human review. Caveat flags capabilities, not confirmed intent, and can produce false positives. Disagree with this verdict? Use Dispute below.

48
security
70
transparency
70
maintenance

Findings (5)

Pattern match high

Instructs covert action — may act without user awareness

references/installation.md · code · quietly

Pattern match medium

conda install — installs packages via conda

references/installation_quick.md · code · conda install

Pattern match medium

subprocess execution — runs system commands from Python

scripts/generate_feishu_report.py · prose · downgraded · subprocess.run(

Pattern match medium

Long base64 string (100+ chars) — likely obfuscated payload

scripts/test.sh · prose · downgraded · MKTAYIAKQRQISFVKSHFSRQLEERLGLIEVQAPILSRVGDGTQDNLSGAEKAVQVKVKALPDAQFEVVHSLAKWKRQT

Pattern match low

Python shutil file operation — copies/moves/deletes files

scripts/run_v2.py · prose · downgraded · shutil.copy(

Why the tier is capped

Execution sink present in raw bytes (Hard Floor: class B/D/F). Final tier capped at Caution — cannot be lifted by any downgrade, example-payload opt-in, or allowlist.

Permissions & capabilities

No declared permissions — minimal attack surface.

Is this flag fair?

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