Caveat verdict

protein-key-fragment-analysis

88
🟢 Trusted
No high-risk patterns surfaced by the deep scan — automated capability review, not behavioral proof.

Bioinformatics skill for protein sequence analysis using local Python scripts and ClustalOmega; all processing is local FASTA file analysis with no network calls or credential access.

⚠ Flagged for review — coarse, uncorroborated signal, not a confirmed exploit. Review the config yourself before installing.

Automated static analysis — not a human review. Caveat flags capabilities, not confirmed intent, and can produce false positives. Disagree with this verdict? Use Dispute below.

15
security
70
transparency
70
maintenance

Permission integrity

Installs packages at runtime — transitive dependencies are not auditable

package_install

Findings (5)

Pattern match critical

Unicode homoglyph detected — uses lookalike characters to evade pattern matching

references/fibrinogen_domains.md · prose

Pattern match high

References sudo — requests elevated privileges

SKILL.md · code · sudo

Pattern match medium

conda install — installs packages via conda

SKILL.md · code · conda install

Pattern match medium

subprocess execution — runs system commands from Python

scripts/protein_key_fragment_analysis.py · prose · downgraded · subprocess.run(

Pattern match medium

Long base64 string (100+ chars) — likely obfuscated payload

scripts/results/Bacillus atrophaeus/Bacillus atrophaeus_key_fragments.json · prose · downgraded · MKHLPAQDEQVFSAIKDERKRQQTKIELIASENFVSEAVMEAQGSVLTNKYAEGYPGKRYYGGCEHVDVVEDIARDRAKE

Why the tier is capped

Execution sink present in raw bytes (Hard Floor: class D). Final tier capped at Caution — cannot be lifted by any downgrade, example-payload opt-in, or allowlist.

Permissions & capabilities

No declared permissions — minimal attack surface.

package_install

Is this flag fair?

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